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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52865603_52866688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52865603 - 52866688

Intron Length:

1086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTATT

5'SS Class:

major

3'SS Sequence:

CATGTTGTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

ATTGTCTAAAGA

Flanking Amino Acid:

AKCVSSPHFQVAERALYYWN

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.3

83.5

35.1

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

67.9

0.4

0.9

65.4

40.7

Minor 5ss

43.2

-0.7

2.6

60.2

44.3

Minor BPS

49.1

-0

64.52

42.4

Associated Gene:

Gene:

PPP2R5C

Ensembl Gene ID:

ENSAPLG00000015971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034295

52796969 - 52875990

79022

ENSAPLT00000016697

52827105 - 52875990

48886