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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52866817_52868346_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52866817 - 52868346

Intron Length:

1530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTACTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAA

U12 Branch Point Sequence:

TTTTACTTATAG

Flanking Amino Acid:

LYRNSKTHWNKTIHGLIYNA

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.9

29.9

Major BPS

72.6

0.56

1.2

75.9

36.3

Major PPT

0.67

0.8

35.8

Minor 5ss

35.5

-1.6

44.2

37.3

Minor BPS

57.4

0.09

69.99

42.7

Associated Gene:

Gene:

PPP2R5C

Ensembl Gene ID:

ENSAPLG00000015971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034295

52796969 - 52875990

79022

ENSAPLT00000016697

52827105 - 52875990

48886