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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52873003_52875858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52873003 - 52875858

Intron Length:

2856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGGTTAACT

Flanking Amino Acid:

KKTVKEEACQAQKDQKKDRP

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

39.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.9

0.72

0.9

78.6

39.1

Minor 5ss

33.7

-1.9

3.5

48.3

Minor BPS

0.55

2.4

91.67

38.1

Associated Gene:

Gene:

PPP2R5C

Ensembl Gene ID:

ENSAPLG00000015971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016697

52827105 - 52875990

48886

ENSAPLT00000034295

52796969 - 52875990

79022