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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5293292_5293920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5293292 - 5293920

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGATAC

5'SS Class:

major

3'SS Sequence:

AACATTTTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TATTATGGAACA

Flanking Amino Acid:

NLSIAVMDYDRVGHNEVIGV

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

68.5

32.6

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

71.4

0.48

0.9

64.6

40.4

Minor 5ss

33.3

-1.9

3.1

42.5

44.6

Minor BPS

47.3

-0.2

2.2

66.47

39.6

Associated Gene:

Gene:

SYT9

Ensembl Gene ID:

ENSAPLG00000006733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022743

5290961 - 5324554

33594

ENSAPLT00000006995

5288605 - 5324554

35950