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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5294093_5295196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5294093 - 5295196

Intron Length:

1104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAGG

5'SS Class:

strong_major

3'SS Sequence:

GTGATTCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATTCTTGTGATT

Flanking Amino Acid:

LKAMDITGASDPYVKVSLMC

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

66.4

45.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

64.6

0.33

42.3

Minor 5ss

31.5

-2.1

3.1

39.9

45.7

Minor BPS

47.8

-0

1.9

69.42

35.9

Associated Gene:

Gene:

SYT9

Ensembl Gene ID:

ENSAPLG00000006733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006995

5288605 - 5324554

35950

ENSAPLT00000022743

5290961 - 5324554

33594