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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52968952_52996038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52968952 - 52996038

Intron Length:

27087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGGGA

5'SS Class:

major

3'SS Sequence:

GCTCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AACTTTTTAAAT

Flanking Amino Acid:

YFYIYKGVRKAADLSKPIDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.3

55.1

44.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

85.2

0.79

0.8

79.9

32.1

Minor 5ss

33.1

-1.9

3.7

47.2

48.2

Minor BPS

63.1

0.49

1.3

72.15

38.8

Associated Gene:

Gene:

WDR20

Ensembl Gene ID:

ENSAPLG00000013384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033046

52968688 - 53012919

44232

ENSAPLT00000013935

52968688 - 53012919

44232