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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53001411_53012491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53001411 - 53012491

Intron Length:

11081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TTAATGTAAACT

Flanking Amino Acid:

ICTWARPGKVGLLSSQNQAN

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

0.6

1.2

75.9

36.3

Major PPT

82.4

0.73

0.9

76.3

37.7

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

-0

2.3

72.89

43.9

Associated Gene:

Gene:

WDR20

Ensembl Gene ID:

ENSAPLG00000013384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013935

52968688 - 53012919

44232