Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_53031877_53035909_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53031877 - 53035909

Intron Length:

4033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTATTTTAAACT

Flanking Amino Acid:

MSKYKLVGKIGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

58.7

40.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

89.4

0.89

0.7

88.9

28.2

Minor 5ss

31.8

-2.1

3.6

46.4

43.4

Minor BPS

60.8

0.42

1.7

75.56

41.8

Associated Gene:

Gene:

MOK

Ensembl Gene ID:

ENSAPLG00000013215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043810

53013590 - 53035916

22327

ENSAPLT00000025500

53013523 - 53035916

22394