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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53039426_53041564_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53039426 - 53041564

Intron Length:

2139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCGATTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATACTTTTATCT

Flanking Amino Acid:

ETVGLQPGGQNCNSGESRHL

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.8

39.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

67.8

0.4

1.1

72.2

37.3

Minor 5ss

37.8

-1.4

3.5

55.9

48.3

Minor BPS

56.7

0.29

1.5

72.22

38.6

Associated Gene:

Gene:

ZNF839

Ensembl Gene ID:

ENSAPLG00000013003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013544

53037268 - 53048660

11393