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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53041817_53042709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53041817 - 53042709

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGTTC

5'SS Class:

strong_major

3'SS Sequence:

TGGCTCTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

CTACTTTGAACT

Flanking Amino Acid:

VFRRKARLKELIQQCDNEDL

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

74.1

37.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

74.4

0.55

0.9

68.2

37.5

Minor 5ss

40.2

-1.1

3.5

58.4

46.5

Minor BPS

56.8

0.29

1.4

70.65

40.2

Associated Gene:

Gene:

ZNF839

Ensembl Gene ID:

ENSAPLG00000013003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013544

53037268 - 53048660

11393