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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53043325_53044865_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53043325 - 53044865

Intron Length:

1541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTGTCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTTCTTGTAACT

Flanking Amino Acid:

QQPVEIKDAKVAESLGITEI

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

68.1

0.41

1.1

67.2

37.8

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

61.5

0.44

84.55

36.3

Associated Gene:

Gene:

ZNF839

Ensembl Gene ID:

ENSAPLG00000013003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013544

53037268 - 53048660

11393