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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53045926_53047668_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53045926 - 53047668

Intron Length:

1743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACCTCC

5'SS Class:

weak_major

3'SS Sequence:

TTCAATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTTCTTTCAATT

Flanking Amino Acid:

GNLCTLFEKDGFNPLNGENC

Intron Amino Acid Position:

729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.2

59.4

40.7

Major BPS

76.9

0.67

1.2

31.9

Major PPT

83.3

0.75

0.8

80.6

36.5

Minor 5ss

52.9

0.1

2.4

65.8

40.5

Minor BPS

63.9

0.51

1.5

81.05

34.8

Associated Gene:

Gene:

ZNF839

Ensembl Gene ID:

ENSAPLG00000013003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013544

53037268 - 53048660

11393