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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53056172_53057365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53056172 - 53057365

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TGTTTCTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CCTGCCTTATGT

Flanking Amino Acid:

NKIVNMKISEQFQDNKLEIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

73.8

0.59

1.3

72.8

Major PPT

79.3

0.66

0.9

78.4

35.1

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

49.3

0.03

2.1

66.83

49.8

Associated Gene:

Gene:

CINP

Ensembl Gene ID:

ENSAPLG00000012968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013505

53052636 - 53057442

4807