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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53063569_53063706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53063569 - 53063706

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TTTGTTCCAACA

Flanking Amino Acid:

LNQMKKYNFEGKCESITFVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

72.3

37.6

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

78.5

0.64

0.9

74.4

35.3

Minor 5ss

33.4

-1.9

3.6

46.6

48.7

Minor BPS

48.6

-0.1

1.9

67.52

39.2

Associated Gene:

Gene:

TECPR2

Ensembl Gene ID:

ENSAPLG00000012414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012964

53063284 - 53100802

37519