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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53081909_53085464_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53081909 - 53085464

Intron Length:

3556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGACAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TTGCTAATAACC

Flanking Amino Acid:

HWTKLDLSQLGAIKLISLSC

Intron Amino Acid Position:

1269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

73.4

37.3

Major BPS

70.1

0.5

70.3

31.9

Major PPT

74.7

0.56

72.1

Minor 5ss

39.7

-1.2

3.1

48.1

Minor BPS

49.4

-0

1.9

65.89

39.1

Associated Gene:

Gene:

TECPR2

Ensembl Gene ID:

ENSAPLG00000012414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012964

53063284 - 53100802

37519