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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53208230_53225044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53208230 - 53225044

Intron Length:

16815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

CTTTGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

ATTGTATGAAAT

Flanking Amino Acid:

SPNQNLSEAKLDEYIAIAKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.3

76.2

39.9

Major BPS

62.7

0.32

1.4

63.4

Major PPT

89.9

0.9

0.7

29.4

Minor 5ss

40.2

-1.1

37.2

Minor BPS

47.8

-0

1.9

69.63

40.7

Associated Gene:

Gene:

RCOR1

Ensembl Gene ID:

ENSAPLG00000012214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012726

53208145 - 53245063

36919