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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5321236_5324129_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5321236 - 5324129

Intron Length:

2894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTCAGTAAC

5'SS Class:

major

3'SS Sequence:

ATTTTCACTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTATTTTCACT

Flanking Amino Acid:

RQTTEPTSSARHNSIRRQLN

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

72.7

38.8

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

70.9

0.47

1.1

74.1

Minor 5ss

31.9

-2.1

2.6

38.5

39.3

Minor BPS

63.2

0.5

1.8

83.78

37.4

Associated Gene:

Gene:

SYT9

Ensembl Gene ID:

ENSAPLG00000006733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022743

5290961 - 5324554

33594

ENSAPLT00000006995

5288605 - 5324554

35950