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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53231995_53235485_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53231995 - 53235485

Intron Length:

3491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

CACAAAGTAATA

Flanking Amino Acid:

ARKQKREREESEDEMEEANG

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

89.2

0.88

0.7

81.2

36.5

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

37.9

-0.9

2.1

43.12

38.6

Associated Gene:

Gene:

RCOR1

Ensembl Gene ID:

ENSAPLG00000012214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042431

53223831 - 53245006

21176

ENSAPLT00000012726

53208145 - 53245063

36919