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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53235565_53239890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53235565 - 53239890

Intron Length:

4326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAATTC

5'SS Class:

major

3'SS Sequence:

TGCTATTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

ATTTTGTCAAAT

Flanking Amino Acid:

VEQNKESKKEVPPAETVPQV

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

33.6

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

78.7

0.65

0.9

76.4

37.3

Minor 5ss

47.9

-0.2

2.9

67.6

43.7

Minor BPS

0.01

2.3

75.64

40.8

Associated Gene:

Gene:

RCOR1

Ensembl Gene ID:

ENSAPLG00000012214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042431

53223831 - 53245006

21176

ENSAPLT00000012726

53208145 - 53245063

36919