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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53318879_53339059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

53318879 - 53339059

Intron Length:

20181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

GTTTTCTTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

73.2

39.3

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

85.2

0.79

0.8

80.2

31.4

Minor 5ss

39.2

-1.2

3.1

52.5

44.7

Minor BPS

69.5

0.69

1.6

83.97

37.3

Associated Gene:

Gene:

TRAF3

Ensembl Gene ID:

ENSAPLG00000011933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038265

53303877 - 53366279

62403

ENSAPLT00000023325

53303877 - 53366279

62403