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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53349839_53364311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53349839 - 53364311

Intron Length:

14473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCATGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTCTTTTAACT

Flanking Amino Acid:

CSVKTLMRSERVIDSQAEKL

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

66.9

0.38

1.1

68.4

36.8

Minor 5ss

35.2

-1.7

49.5

46.3

Minor BPS

81.3

1.06

92.89

28.4

Associated Gene:

Gene:

TRAF3

Ensembl Gene ID:

ENSAPLG00000011933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024164

53339075 - 53366279

27205