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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53364487_53365707_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53364487 - 53365707

Intron Length:

1221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CGTTTTCTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

CTTCTCTTACCC

Flanking Amino Acid:

KTAGQGARNTSLLETQLNRH

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

69.2

0.48

37.1

Major PPT

77.8

0.63

0.9

73.4

35.9

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

61.8

0.35

1.7

71.01

40.5

Associated Gene:

Gene:

TRAF3

Ensembl Gene ID:

ENSAPLG00000011933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023325

53303877 - 53366279

62403

ENSAPLT00000022307

53302516 - 53366656

64141

ENSAPLT00000012446

53303145 - 53366656

63512

ENSAPLT00000038265

53303877 - 53366279

62403

ENSAPLT00000024164

53339075 - 53366279

27205