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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53380556_53382857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53380556 - 53382857

Intron Length:

2302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCACAT

U12 Branch Point Sequence:

CGGGTCACATTT

Flanking Amino Acid:

LFLLGVLQLLAAARAAYKQW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.8

78.5

30.1

Major BPS

59.9

0.25

1.2

38.9

Major PPT

0.54

0.8

65.3

36.2

Minor 5ss

30.7

-2.2

2.5

31.6

35.9

Minor BPS

36.5

-0.9

1.8

44.76

40.6

Associated Gene:

Gene:

AMN

Ensembl Gene ID:

ENSAPLG00000011646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033744

53380513 - 53396981

16469

ENSAPLT00000012140

53380513 - 53396967

16455