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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53391211_53392440_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53391211 - 53392440

Intron Length:

1230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAGG

5'SS Class:

major

3'SS Sequence:

TCCTCCCGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

AGGTGCTCATCG

Flanking Amino Acid:

RLRSISLMGQELSSAEAWAE

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.2

66.4

45.1

Major BPS

79.7

0.74

79.6

35.6

Major PPT

64.5

0.33

61.2

Minor 5ss

38.4

-1.3

2.9

49.5

46.3

Minor BPS

42.7

-0.6

2.2

46.76

45.8

Associated Gene:

Gene:

AMN

Ensembl Gene ID:

ENSAPLG00000011646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033744

53380513 - 53396981

16469

ENSAPLT00000012140

53380513 - 53396967

16455