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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53392579_53392687_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53392579 - 53392687

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

AGGGACTGACGC

Flanking Amino Acid:

SSGCACGNTQDGHRICASLL

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

55.9

0.15

1.2

Major PPT

81.3

0.7

0.8

73.1

37.3

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

36.5

-1

1.9

39.06

39.5

Associated Gene:

Gene:

AMN

Ensembl Gene ID:

ENSAPLG00000011646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033744

53380513 - 53396981

16469

ENSAPLT00000012140

53380513 - 53396967

16455