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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53392791_53393569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53392791 - 53393569

Intron Length:

779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TGGGCTCTGACT

Flanking Amino Acid:

RPLGHCCGVCGAVVTLDFTP

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

69.1

0.47

60.7

37.6

Major PPT

0.59

0.9

69.2

37.1

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

49.6

0.05

1.8

68.22

Associated Gene:

Gene:

AMN

Ensembl Gene ID:

ENSAPLG00000011646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033744

53380513 - 53396981

16469

ENSAPLT00000012140

53380513 - 53396967

16455