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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53393653_53393881_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53393653 - 53393881

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTCCC

5'SS Class:

major

3'SS Sequence:

GTGTTTTGGAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TGTTTTGGAAAG

Flanking Amino Acid:

DRVVQSWLSLPKYEGVQMAI

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

62.6

42.1

Major BPS

72.7

0.56

30.1

Major PPT

55.9

0.13

1.3

59.1

45.5

Minor 5ss

34.6

-1.8

3.1

42.3

39.5

Minor BPS

43.8

-0.6

2.1

53.61

41.4

Associated Gene:

Gene:

AMN

Ensembl Gene ID:

ENSAPLG00000011646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033744

53380513 - 53396981

16469

ENSAPLT00000012140

53380513 - 53396967

16455