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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53394069_53394626_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53394069 - 53394626

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAACCCTG

5'SS Class:

weak_major

3'SS Sequence:

TGCTCCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CTCTCCCCATTC

Flanking Amino Acid:

TDLVGDIAQHGAALGISSSR

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.3

54.9

49.4

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

77.1

0.61

0.8

68.8

37.1

Minor 5ss

47.5

-0.2

2.9

65.9

45.1

Minor BPS

-0.4

54.87

43.7

Associated Gene:

Gene:

AMN

Ensembl Gene ID:

ENSAPLG00000011646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033744

53380513 - 53396981

16469

ENSAPLT00000012140

53380513 - 53396967

16455