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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53396724_53396856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53396724 - 53396856

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CCTTCCCCATCC

Flanking Amino Acid:

KGFDNPMFDVEPLESGSVEE

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

68.4

36.9

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

71.9

0.49

0.9

64.8

36.4

Minor 5ss

27.7

-2.6

31.6

37.6

Minor BPS

45.9

-0.3

2.1

59.12

45.7

Associated Gene:

Gene:

AMN

Ensembl Gene ID:

ENSAPLG00000011646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012140

53380513 - 53396967

16455