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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53441031_53443123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53441031 - 53443123

Intron Length:

2093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCTTTTTAAAA

Flanking Amino Acid:

ETYGKIMNHEERFQFPSHVT

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

83.5

27.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

36.9

-1.5

3.1

49.9

40.5

Minor BPS

70.1

0.63

1.3

75.65

35.9

Associated Gene:

Gene:

CDC42BPB

Ensembl Gene ID:

ENSAPLG00000010525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035753

53402177 - 53494776

92600

ENSAPLT00000011055

53402785 - 53494776

91992

ENSAPLT00000041679

53402177 - 53494776

92600