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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53467594_53494598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53467594 - 53494598

Intron Length:

27005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCCCG

5'SS Class:

major

3'SS Sequence:

TTTCCCTAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTCCCTAAACA

Flanking Amino Acid:

DRYVSDFLEWARPFTKLVKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

53.2

45.5

Major BPS

84.4

0.85

34.5

Major PPT

0.54

0.9

70.4

Minor 5ss

32.3

-2

2.9

31.8

42.1

Minor BPS

74.5

0.76

1.6

85.03

34.5

Associated Gene:

Gene:

CDC42BPB

Ensembl Gene ID:

ENSAPLG00000010525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041679

53402177 - 53494776

92600

ENSAPLT00000035753

53402177 - 53494776

92600

ENSAPLT00000011055

53402785 - 53494776

91992