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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53525262_53528487_F

Intron Information:

Intron Rank:

139940

Intron Class:

major

Intron Phase:

Intron Coordinates:

53525262 - 53528487

Intron Length:

3226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTCC

5'SS Class:

major

3'SS Sequence:

TGTTTGGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACACAA

U12 Branch Point Sequence:

TGTTTGGTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.4

Major BPS

49.3

-0

0.9

56.6

29.3

Major PPT

70.9

0.47

1.1

65.6

44.4

Minor 5ss

38.1

-1.3

3.2

51.4

45.3

Minor BPS

48.6

-0.1

2.6

71.26

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047179

53524715 - 53528947

4233