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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53552307_53556477_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53552307 - 53556477

Intron Length:

4171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTCAGCAGA

5'SS Class:

major

3'SS Sequence:

TCTGGATGAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTTTCTGGATG

Flanking Amino Acid:

GELRWPPDDLNFVETKKEKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.3

62.6

43.8

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

49.5

-0

1.2

49.1

42.3

Minor 5ss

35.9

-1.6

2.8

40.9

39.3

Minor BPS

63.1

0.27

1.5

70.54

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010934

53549520 - 53556535

7016