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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53626702_53628928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53626702 - 53628928

Intron Length:

2227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TTAATCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTTCGTTTAATC

Flanking Amino Acid:

LLDWVANTYRSELFLGHPDL

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

82.1

0.72

0.9

73.6

41.4

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

58.2

0.24

1.8

68.24

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021057

53622399 - 53629563

7165