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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53658996_53664309_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53658996 - 53664309

Intron Length:

5314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

CTGAAATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCTTTCTGAAAT

Flanking Amino Acid:

LAVVPGSRSRARRKMLKMLP

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

69.1

41.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

70.1

0.45

62.1

43.1

Minor 5ss

38.1

-1.3

48.4

41.1

Minor BPS

66.8

0.6

1.5

81.8

39.4

Associated Gene:

Gene:

TNFAIP2

Ensembl Gene ID:

ENSAPLG00000012637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013178

53658238 - 53674675

16438