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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53667340_53668634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53667340 - 53668634

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

CCTTGCAAAATG

Flanking Amino Acid:

LLSWVHNIYPKDMRKDPVLA

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

84.5

0.78

0.8

76.7

37.5

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

41.7

-0.7

2.2

47.18

46.5

Associated Gene:

Gene:

TNFAIP2

Ensembl Gene ID:

ENSAPLG00000012637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013178

53658238 - 53674675

16438