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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53670701_53670787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53670701 - 53670787

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGTAA

5'SS Class:

major

3'SS Sequence:

ATTTCCCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

CTTTTCCCATTT

Flanking Amino Acid:

LSRELAALLRSYKDAFEDFK

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

68.1

34.8

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

80.5

0.69

0.8

71.1

35.2

Minor 5ss

29.5

-2.3

3.3

37.2

47.4

Minor BPS

45.7

-0.2

2.1

68.16

43.2

Associated Gene:

Gene:

TNFAIP2

Ensembl Gene ID:

ENSAPLG00000012637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013178

53658238 - 53674675

16438