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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53671200_53672226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53671200 - 53672226

Intron Length:

1027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAG

U12 Branch Point Sequence:

TAGAAACTAAGC

Flanking Amino Acid:

LLQQLFVQLKPIYKKFTENK

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

64.1

42.1

Major BPS

0.1

1.4

61.7

34.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

-2.3

3.4

45.6

Minor BPS

38.5

-0.8

2.1

47.67

40.8

Associated Gene:

Gene:

TNFAIP2

Ensembl Gene ID:

ENSAPLG00000012637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013178

53658238 - 53674675

16438