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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53673295_53673901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53673295 - 53673901

Intron Length:

607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTACGTGAG

5'SS Class:

major

3'SS Sequence:

TCCCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CACTGCTGACCG

Flanking Amino Acid:

AELEAFCTKNGSQATWLNSA

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

65.5

40.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

81.8

0.71

0.7

76.4

25.7

Minor 5ss

33.4

-1.9

3.4

43.9

44.2

Minor BPS

42.5

-0.7

2.1

44.78

47.1

Associated Gene:

Gene:

TNFAIP2

Ensembl Gene ID:

ENSAPLG00000012637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013178

53658238 - 53674675

16438