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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53707231_53708678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53707231 - 53708678

Intron Length:

1448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTGGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TGCTCTGGAACA

Flanking Amino Acid:

FGKKKTDIYEALVKSVNIII

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

61.9

0.27

1.1

57.4

42.2

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

-0

2.1

64.58

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016416

53698532 - 53720810

22279