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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53709528_53710581_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53709528 - 53710581

Intron Length:

1054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTGGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TTTTCCATATGC

Flanking Amino Acid:

LRILENCCILRTAWCKLTHI

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.1

76.3

32.7

Major BPS

85.7

0.89

0.8

22.2

Major PPT

70.8

0.47

1.1

64.5

45.9

Minor 5ss

30.1

-2.3

2.7

34.9

41.1

Minor BPS

54.3

0.12

2.2

75.29

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016416

53698532 - 53720810

22279