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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53713320_53716459_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53713320 - 53716459

Intron Length:

3140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TATATGTATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

TEEKLLAVTRKEVGKALEEA

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

37.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.6

0.4

59.3

Minor 5ss

32.6

-2

3.4

40.6

45.1

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016416

53698532 - 53720810

22279