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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53728138_53728522_F

Intron Information:

Intron Rank:

142675

Intron Class:

major

Intron Phase:

Intron Coordinates:

53728138 - 53728522

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

GAGTCTTCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

1.2

84.1

30.2

Major BPS

78.2

0.7

79.9

32.6

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

39.2

-1.2

2.8

46.3

Minor BPS

63.5

0.5

1.6

74.36

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026741

53727150 - 53728907

1758