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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53750803_53752806_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
53750803 - 53752806

Intron Length:
2004

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTGAGCGCT

5'SS Class:
major

3'SS Sequence:
TTAACACTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAC

U12 Branch Point Sequence:
TGTTTATTAACA

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.2
0.62
1
66.2
39.6

Major BPS
81.9
0.79
0.8
81.9
25

Major PPT
74.2
0.55
0.9
66.9
39.1

Minor 5ss
34
-1.8
3.4
48.7
47

Minor BPS
72.4
0.7
1.5
81.25
33.5

Associated Gene:

Gene:
EIF5

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

53750607 - 53757416
6810