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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53812591_53818005_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53812591 - 53818005

Intron Length:

5415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTATCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ACTTATATAATT

Flanking Amino Acid:

EKEARAKFRQIVSAVQYCHQ

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

88.8

Major BPS

0.72

78.4

31.2

Major PPT

81.8

0.71

0.9

74.1

40.6

Minor 5ss

45.4

-0.5

2.5

59.5

45.1

Minor BPS

53.2

0.18

1.8

72.01

39.2

Associated Gene:

Gene:

MARK3

Ensembl Gene ID:

ENSAPLG00000010536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024417

53785570 - 53844499

58930

ENSAPLT00000041899

53783317 - 53843607

60291

ENSAPLT00000020582

53783317 - 53843607

60291

ENSAPLT00000041695

53785570 - 53843607

58038

ENSAPLT00000017358

53783317 - 53843607

60291

ENSAPLT00000037213

53783317 - 53844607

61291

ENSAPLT00000011002

53783317 - 53844607

61291

ENSAPLT00000027843

53785570 - 53844499

58930

ENSAPLT00000045195

53783317 - 53843607

60291