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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53820209_53820441_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53820209 - 53820441

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTGAG

5'SS Class:

strong_major

3'SS Sequence:

TATTTGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TGTTTGTTACTT

Flanking Amino Acid:

ELDISDQKRIDIMVGMGYSQ

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

74.2

36.3

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

83.1

0.74

0.8

81.5

35.9

Minor 5ss

32.1

-2

3.1

40.2

45.9

Minor BPS

50.3

0.09

2.3

75.64

41.8

Associated Gene:

Gene:

MARK3

Ensembl Gene ID:

ENSAPLG00000010536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011002

53783317 - 53844607

61291

ENSAPLT00000027843

53785570 - 53844499

58930

ENSAPLT00000045195

53783317 - 53843607

60291

ENSAPLT00000024417

53785570 - 53844499

58930

ENSAPLT00000041899

53783317 - 53843607

60291

ENSAPLT00000020582

53783317 - 53843607

60291

ENSAPLT00000041695

53785570 - 53843607

58038

ENSAPLT00000017358

53783317 - 53843607

60291

ENSAPLT00000037213

53783317 - 53844607

61291