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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53823406_53827395_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53823406 - 53827395

Intron Length:

3990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

GTGAATTACCTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CATTTTATAATT

Flanking Amino Acid:

ERKKSSAVPSLLSRSWKIDR

Intron Amino Acid Position:

493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

40.9

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

56.3

0.14

47.5

44.8

Minor 5ss

37.1

-1.5

2.8

43.2

43.8

Minor BPS

58.1

0.33

1.6

73.1

38.4

Associated Gene:

Gene:

MARK3

Ensembl Gene ID:

ENSAPLG00000010536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024417

53785570 - 53844499

58930