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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53836465_53840981_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53836465 - 53840981

Intron Length:

4517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCAATGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTCTTTTCAATG

Flanking Amino Acid:

RRNMSFRFIKRLPTEYERNG

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.14

1.7

71.1

38.7

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

57.7

0.1

1.6

62.38

40.7

Associated Gene:

Gene:

MARK3

Ensembl Gene ID:

ENSAPLG00000010536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027843

53785570 - 53844499

58930

ENSAPLT00000024417

53785570 - 53844499

58930

ENSAPLT00000045195

53783317 - 53843607

60291

ENSAPLT00000011002

53783317 - 53844607

61291

ENSAPLT00000041695

53785570 - 53843607

58038

ENSAPLT00000037213

53783317 - 53844607

61291