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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53836465_53843261_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53836465 - 53843261

Intron Length:

6797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAC

U12 Branch Point Sequence:

TGACTAAAAACT

Flanking Amino Acid:

RRNMSFRFIKSRNVAVDQKD

Intron Amino Acid Position:

692

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

52.9

0.07

1.1

59.6

32.7

Major PPT

82.9

0.74

0.9

80.2

37.3

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

42.4

-0.5

61.32

41.6

Associated Gene:

Gene:

MARK3

Ensembl Gene ID:

ENSAPLG00000010536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017358

53783317 - 53843607

60291