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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53841027_53843261_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53841027 - 53843261

Intron Length:

2235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGTA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAC

U12 Branch Point Sequence:

TGACTAAAAACT

Flanking Amino Acid:

YERNGRFEGSSRNVAVDQKD

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.3

31.1

Major BPS

52.9

0.07

1.1

59.6

32.7

Major PPT

82.9

0.74

0.9

80.2

37.3

Minor 5ss

27.4

-2.6

3.5

37.1

47.5

Minor BPS

42.4

-0.5

61.32

41.6

Associated Gene:

Gene:

MARK3

Ensembl Gene ID:

ENSAPLG00000010536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024417

53785570 - 53844499

58930

ENSAPLT00000045195

53783317 - 53843607

60291

ENSAPLT00000020582

53783317 - 53843607

60291

ENSAPLT00000041695

53785570 - 53843607

58038

ENSAPLT00000011002

53783317 - 53844607

61291

ENSAPLT00000037213

53783317 - 53844607

61291

ENSAPLT00000027843

53785570 - 53844499

58930